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PDBsum entry 2a01

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2a01 calculated with MOLE 2.0 PDB id
2a01
Pores calculated on whole structure Pores calculated excluding ligands

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14 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.30 2.62 26.5 0.12 0.56 8.3 71 3 0 1 4 3 1 0  
2 1.28 2.64 30.4 0.13 0.50 13.1 73 4 0 0 5 3 1 0  
3 1.55 1.55 36.9 -1.54 -0.44 17.4 84 4 3 6 2 2 0 0  
4 1.36 1.72 44.5 -0.82 -0.30 11.2 84 4 2 5 5 2 0 0  
5 1.27 1.29 49.9 -0.32 0.11 13.7 79 7 1 3 5 3 1 0  
6 1.28 1.29 59.4 -0.01 0.11 10.2 80 7 1 3 8 3 1 0  
7 1.27 2.75 80.5 -0.35 0.29 11.5 73 5 2 4 9 6 0 0  
8 1.27 1.30 112.0 -0.42 0.11 12.3 76 8 2 7 14 7 0 0  
9 1.71 1.78 27.6 -1.38 -0.18 17.3 76 4 1 0 2 1 1 0  
10 1.26 1.46 63.1 0.03 0.20 14.8 75 7 4 2 13 5 0 0  
11 1.16 1.51 45.0 0.07 0.14 15.3 76 8 2 1 9 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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