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PDBsum entry 1zzc

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1zzc calculated with MOLE 2.0 PDB id
1zzc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.23 1.39 16.9 -0.07 -0.27 2.2 75 0 0 0 3 1 2 0  
2 1.20 1.39 21.2 -0.31 -0.34 6.0 82 2 0 1 3 1 1 0  
3 1.22 1.40 21.7 0.04 -0.37 2.2 89 0 0 1 3 1 1 0  
4 1.19 1.28 23.6 -1.80 -0.64 19.5 91 2 2 2 2 0 0 0  
5 1.19 1.29 24.4 -1.54 -0.55 18.8 91 3 2 2 2 0 0 0  
6 1.18 3.78 43.2 -0.23 0.15 13.3 78 3 2 2 8 3 0 0  TRS 503 A
7 1.18 3.91 44.0 -0.38 0.10 14.9 78 3 2 2 8 3 0 0  TRS 503 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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