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PDBsum entry 1zrt

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Pore analysis for: 1zrt calculated with MOLE 2.0 PDB id
1zrt
Pores calculated on whole structure Pores calculated excluding ligands

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18 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.19 2.87 31.6 -0.94 -0.27 23.2 80 3 4 0 4 2 0 0  UNL 505 C
2 1.61 1.61 42.3 -1.09 -0.36 21.8 85 4 3 0 4 2 0 0  
3 1.19 2.87 43.0 -1.13 -0.31 21.8 77 2 4 0 4 2 0 0  UNL 505 C
4 2.00 2.12 52.1 -0.92 -0.10 16.9 78 4 3 2 6 4 1 0  HEC 501 Q
5 1.53 1.78 55.0 -0.95 -0.21 17.2 78 4 4 3 7 3 2 0  
6 1.43 1.43 79.2 0.81 0.51 9.8 81 3 3 1 16 4 3 0  
7 1.64 1.81 89.4 -0.94 -0.30 19.7 82 7 8 1 9 1 1 0  
8 1.56 1.70 91.5 -1.21 -0.35 19.2 83 7 8 2 10 2 2 0  
9 1.55 1.96 93.0 -0.74 -0.29 17.2 89 8 6 5 12 1 1 0  
10 1.66 1.81 104.6 -1.44 -0.44 20.6 85 10 8 5 10 1 2 0  
11 1.74 1.88 105.1 -1.04 -0.27 19.7 85 6 6 5 6 2 1 0  
12 1.44 2.27 107.7 0.05 0.26 10.8 81 7 5 4 21 7 3 0  UNL 504 C
13 1.44 1.44 108.5 0.70 0.35 8.9 81 5 5 3 23 6 3 0  UNL 504 P PG6 502 Q
14 1.44 2.27 115.1 0.53 0.41 7.6 78 3 2 2 19 7 3 0  UNL 504 C
15 1.44 2.28 116.6 1.88 0.75 3.0 82 2 2 2 33 7 2 0  UNL 504 P PG6 502 Q
16 1.63 1.85 117.4 -1.31 -0.29 20.2 83 10 8 3 12 3 3 0  HEC 501 Q
17 2.67 3.02 128.0 -1.17 -0.36 20.3 84 10 9 9 9 3 1 0  
18 1.17 1.17 144.8 -1.22 -0.34 17.9 84 9 9 13 9 6 2 0  
19 1.44 1.44 155.2 0.49 0.27 10.1 81 6 5 3 26 7 4 0  UNL 504 C
20 1.17 1.17 157.9 -1.35 -0.40 18.8 85 12 9 16 9 5 2 0  
21 1.53 2.26 162.2 -0.34 0.02 13.4 83 9 10 7 26 7 3 0  UNL 504 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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