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PDBsum entry 1zr3

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1zr3 calculated with MOLE 2.0 PDB id
1zr3
Pores calculated on whole structure Pores calculated excluding ligands

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16 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.27 2.08 27.1 -1.55 -0.24 27.0 78 5 1 2 4 1 0 0  
2 2.94 4.74 32.4 -2.10 -0.33 35.1 80 5 6 1 4 1 0 0  
3 3.34 3.83 33.8 -2.37 -0.71 29.8 91 5 3 5 1 1 0 0  
4 1.85 2.54 35.7 -1.26 -0.31 22.9 80 5 1 2 3 1 0 0  
5 3.34 3.82 36.1 -2.15 -0.64 26.1 85 8 3 4 1 1 0 0  
6 1.31 2.90 44.8 -1.63 -0.57 19.6 82 8 4 6 2 1 0 0  
7 2.64 3.51 44.7 -2.42 -0.61 31.7 77 6 4 1 0 1 0 0  
8 2.76 4.16 51.5 -1.53 -0.21 26.9 75 11 3 1 3 2 0 0  
9 1.86 2.54 54.5 -1.53 -0.50 20.5 85 9 4 8 5 2 0 0  
10 2.62 2.62 56.3 -2.01 -0.63 26.4 89 6 5 8 4 1 0 0  
11 1.86 2.55 57.1 -1.67 -0.31 28.5 82 8 6 4 7 2 0 0  
12 2.62 2.61 58.6 -1.95 -0.60 24.7 85 9 5 7 4 1 0 0  
13 1.30 1.99 62.4 -1.68 -0.59 19.6 78 8 4 5 2 1 0 0  
14 1.86 2.54 76.2 -1.40 -0.27 23.8 78 14 3 4 6 3 0 0  
15 1.22 2.83 87.1 -1.08 -0.25 19.0 80 14 4 9 11 4 0 0  
16 1.24 2.94 91.2 -1.41 -0.32 22.6 80 14 5 8 10 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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