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PDBsum entry 1zph

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Top Page dna_rna ligands metals tunnels links
Tunnel analysis for: 1zph calculated with MOLE 2.0 PDB id
1zph
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.05 5.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  9 DC A,10 DG A,1 SN8 B,17 DA B,18 DA B,19 DT B
2 2.37 6.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  7 DT A,8 DT A,9 DC A,1 SN8 B,18 DA B,19 DT B,20
DT B
3 1.98 9.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  7 DT A,8 DT A,9 DC A,10 DG A,1 SN8 B,18 DA B,19
DT B
4 1.91 10.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  8 DT A,9 DC A,1 SN8 B,17 DA B,18 DA B,19 DT B,20
DT B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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