PDBsum entry 1zfe Go to PDB code:  Tunnel analysis for: 1zfe calculated with MOLE 2.0 PDB id 1zfe Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels Length Hydropathy Hydrophobicity Polarity Mutability Residue..type Ligands Radius 1 3.18 6.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  3 DT A,4 DG A,5 DC A,18 DA B,19 DG B,20 DG B 2 2.80 9.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  3 DT A,4 DG A,5 DC A,19 DG B,20 DG B 3 2.31 10.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  3 DT A,4 DG A,19 DG B,20 DG B 4 3.08 12.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  3 DT A,4 DG A,5 DC A,6 DG A,7 DC A,18 DA B,19 DG B,20 DG B 5 2.70 14.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  3 DT A,4 DG A,5 DC A,6 DG A,7 DC A,18 DA B,19 DG B,20 DG B 6 2.26 4.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  8 DA A,9 DG A,10 DG A,12 DC B,13 DT B,14 DG B 7 2.48 7.0 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  8 DA A,9 DG A,10 DG A,13 DT B,14 DG B 8 3.18 8.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  8 DA A,9 DG A,10 DG A,14 DG B,15 DC B,16 DG B 9 2.12 15.0 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  8 DA A,9 DG A,10 DG A,12 DC B,13 DT B,14 DG B,15 DC B,16 DG B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.