PDBsum entry 1z2c

Pore analysis for: 1z2c calculated with

MOLE 2.0

PDB id

1z2c

Pores calculated on whole structure

Pores calculated excluding ligands

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10 pores, coloured by radius

9 pores, coloured by radius

9 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.24

2.05

26.1

-0.91

-0.29

11.3

88

1

1

4

2

1

0

0

2

1.64

3.79

26.5

-0.35

0.06

13.6

69

2

3

0

1

2

1

1

GNP 195 C

3

1.79

1.97

31.1

-1.14

-0.36

16.0

77

1

5

1

1

1

1

1

GNP 195 A

4

1.16

1.80

36.0

-1.56

-0.46

14.9

81

3

2

3

1

1

2

0

5

1.37

1.37

51.4

-1.02

-0.24

13.3

79

3

7

2

2

2

0

1

MG 194 C GNP 195 C

6

1.74

2.19

93.2

-0.70

-0.09

17.4

83

2

11

2

8

2

1

1

GNP 195 A

7

2.54

4.66

117.3

-2.13

-0.47

22.8

86

10

8

7

4

2

1

0

8

3.35

3.64

31.0

1.52

0.62

11.4

78

2

2

0

11

3

0

0

9

2.57

5.01

39.0

1.24

0.61

16.4

82

3

2

1

7

2

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.