PDBsum entry 1z0y

Pore analysis for: 1z0y calculated with

MOLE 2.0

PDB id

1z0y

Pores calculated on whole structure

Pores calculated excluding ligands

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9 pores, coloured by radius

9 pores, coloured by radius

9 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

2.73

3.02

29.2

0.02

0.25

8.9

68

2

2

4

5

4

1

0

2

1.35

1.35

38.5

-0.12

0.01

7.5

65

1

3

2

4

4

1

1

3

1.82

1.81

39.8

0.40

0.05

4.9

63

2

2

0

2

4

2

2

4

3.35

3.36

46.3

0.60

0.44

3.5

70

0

2

5

8

7

1

0

5

2.26

2.26

55.7

-0.53

0.01

13.5

69

2

5

4

6

4

1

0

6

2.48

2.72

79.0

-0.62

-0.13

5.4

68

1

3

6

6

7

1

0

7

2.49

2.74

87.9

-0.14

-0.40

8.0

78

2

5

3

6

3

0

0

8

1.91

1.91

103.1

-0.56

-0.30

8.4

78

5

3

7

5

6

0

2

9

1.92

1.91

129.5

-0.47

-0.31

6.6

77

3

4

8

5

6

0

2

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.