PDBsum entry 1yxq Go to PDB code:  Pore analysis for: 1yxq calculated with MOLE 2.0 PDB id 1yxq Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.42 3.68 31.7 0.69 -0.13 6.0 94 0 1 1 4 0 0 0  SWI 600 B 2 1.37 1.58 96.9 -0.46 -0.11 11.0 80 6 2 3 8 3 2 0  HIC 73 B SWI 600 B ATP 2380 B MG 2390 B 3 1.05 3.24 26.1 1.85 0.86 2.3 70 1 0 1 6 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.