PDBsum entry 1ynh Go to PDB code:  Pore analysis for: 1ynh calculated with MOLE 2.0 PDB id 1ynh Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.04 3.15 26.4 -1.28 -0.39 16.2 84 3 2 3 4 2 0 0   2 3.42 4.35 70.0 -1.62 -0.33 23.6 83 10 5 4 2 4 1 0   3 2.37 3.82 70.6 -2.10 -0.47 26.1 84 9 8 4 2 2 2 0   4 3.42 4.32 87.3 -1.66 -0.41 24.0 80 9 6 2 1 4 1 0   5 2.40 3.75 95.4 -2.37 -0.54 29.6 83 10 9 5 1 3 1 0   6 2.25 2.31 115.5 -1.98 -0.36 26.8 83 15 6 5 3 5 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.