PDBsum entry 1ymh Go to PDB code:  Pore analysis for: 1ymh calculated with MOLE 2.0 PDB id 1ymh Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.78 2.21 39.2 -1.00 -0.25 11.8 75 2 2 1 4 1 4 0   2 1.81 2.44 40.1 -1.43 -0.49 14.0 74 3 2 0 2 1 4 0   3 1.93 1.93 41.5 -1.32 -0.64 12.9 87 1 3 2 3 0 3 0   4 1.86 1.96 70.8 -1.72 -0.67 17.4 88 5 3 7 4 0 2 0   5 1.78 1.78 73.3 -1.60 -0.76 10.2 91 2 3 8 4 0 1 0   6 1.80 1.80 78.8 -1.40 -0.62 6.9 88 2 1 9 6 0 3 0   7 1.62 1.87 101.5 -1.75 -0.79 11.2 93 4 5 11 3 0 1 0   8 1.75 2.20 112.6 -1.69 -0.75 10.4 91 4 4 11 5 0 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.