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PDBsum entry 1y2m
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Tunnel analysis for: 1y2m calculated with  MOLE 2.0
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PDB id
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1y2m
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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3 tunnels,
coloured by tunnel radius |
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3 tunnels,
coloured by
tunnel radius
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3 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.17 |
1.71 |
93.4 |
-0.65 |
-0.25 |
9.8 |
79 |
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6 |
4 |
8 |
17 |
2 |
4 |
0 |
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MSE 497 A MSE 448 B
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2 |
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1.23 |
1.42 |
16.9 |
1.35 |
0.19 |
3.4 |
83 |
1 |
0 |
2 |
5 |
1 |
0 |
0 |
MSE 564 D
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3 |
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1.20 |
1.40 |
17.5 |
1.16 |
0.11 |
4.3 |
82 |
1 |
0 |
2 |
4 |
1 |
0 |
0 |
MSE 564 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program