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PDBsum entry 1y2c

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1y2c calculated with MOLE 2.0 PDB id
1y2c
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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0 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.73 2.03 18.5 0.85 0.70 2.5 74 1 0 2 5 5 1 0  EDO 508 B 3DE 1003 B
2 1.95 1.95 19.5 0.79 0.59 2.7 73 1 0 2 4 5 1 0  EDO 522 A 3DE 1003 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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