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PDBsum entry 1xcb
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Pore analysis for: 1xcb calculated with MOLE 2.0
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PDB id
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1xcb
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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30 pores,
coloured by radius |
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23 pores,
coloured by radius
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23 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.91 |
4.03 |
32.7 |
-2.13 |
-0.64 |
22.8 |
91 |
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4 |
4 |
5 |
4 |
0 |
0 |
0 |
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2 |
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2.02 |
2.72 |
34.2 |
-1.72 |
-0.44 |
17.8 |
89 |
5 |
1 |
5 |
3 |
1 |
1 |
0 |
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3 |
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3.62 |
3.73 |
35.6 |
-2.34 |
-0.56 |
25.7 |
91 |
3 |
4 |
4 |
6 |
0 |
0 |
0 |
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4 |
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2.60 |
3.21 |
37.2 |
-1.83 |
-0.49 |
23.1 |
88 |
4 |
4 |
4 |
5 |
1 |
0 |
0 |
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5 |
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3.42 |
4.46 |
37.5 |
-1.53 |
-0.36 |
24.1 |
89 |
5 |
4 |
2 |
6 |
0 |
1 |
0 |
CA 213 D
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6 |
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2.91 |
4.03 |
39.2 |
-2.14 |
-0.64 |
23.3 |
89 |
5 |
4 |
5 |
3 |
1 |
1 |
0 |
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7 |
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2.02 |
2.69 |
42.3 |
-1.54 |
-0.39 |
18.5 |
85 |
6 |
1 |
4 |
4 |
2 |
1 |
0 |
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8 |
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2.64 |
3.21 |
43.8 |
-1.84 |
-0.51 |
22.6 |
86 |
5 |
4 |
4 |
4 |
2 |
1 |
0 |
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9 |
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1.77 |
2.19 |
59.6 |
-1.47 |
-0.43 |
15.6 |
84 |
7 |
1 |
6 |
5 |
2 |
1 |
0 |
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10 |
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1.78 |
2.20 |
63.5 |
-0.86 |
-0.18 |
17.1 |
85 |
8 |
2 |
6 |
10 |
2 |
2 |
0 |
NAD 212 E
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11 |
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1.80 |
3.23 |
64.8 |
-0.87 |
-0.16 |
18.5 |
81 |
7 |
3 |
4 |
7 |
2 |
3 |
0 |
NAD 212 G
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12 |
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3.45 |
4.49 |
69.7 |
-1.35 |
-0.38 |
19.3 |
81 |
6 |
4 |
4 |
4 |
1 |
2 |
0 |
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13 |
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1.81 |
2.99 |
80.4 |
-0.69 |
-0.13 |
19.3 |
85 |
8 |
5 |
4 |
9 |
1 |
3 |
0 |
NAD 212 G
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14 |
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3.38 |
3.58 |
80.8 |
-1.98 |
-0.32 |
25.2 |
78 |
16 |
5 |
5 |
3 |
4 |
0 |
0 |
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15 |
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3.41 |
4.66 |
82.0 |
-1.78 |
-0.46 |
22.1 |
86 |
8 |
6 |
5 |
7 |
1 |
1 |
0 |
CA 213 D
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16 |
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1.79 |
2.19 |
94.1 |
-1.90 |
-0.27 |
23.7 |
82 |
14 |
5 |
7 |
4 |
3 |
1 |
0 |
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17 |
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1.11 |
1.45 |
96.1 |
-0.83 |
-0.05 |
21.8 |
83 |
8 |
3 |
3 |
9 |
2 |
2 |
0 |
NAD 212 G
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18 |
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1.79 |
2.24 |
97.3 |
-0.93 |
-0.10 |
16.0 |
84 |
8 |
4 |
6 |
8 |
3 |
4 |
0 |
NAD 212 G
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19 |
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1.83 |
2.97 |
98.8 |
-1.25 |
-0.33 |
20.1 |
87 |
10 |
6 |
4 |
12 |
1 |
3 |
0 |
CA 213 D NAD 212 G
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20 |
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1.76 |
2.20 |
102.3 |
-1.30 |
-0.24 |
15.8 |
84 |
7 |
5 |
6 |
5 |
2 |
3 |
0 |
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21 |
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2.28 |
3.40 |
105.8 |
-1.68 |
-0.27 |
25.4 |
78 |
16 |
8 |
4 |
7 |
5 |
2 |
0 |
NAD 212 E
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22 |
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1.20 |
1.68 |
126.7 |
-0.58 |
-0.14 |
18.2 |
80 |
6 |
7 |
3 |
15 |
2 |
8 |
0 |
NAD 212 G
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23 |
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1.77 |
2.15 |
136.1 |
-1.69 |
-0.47 |
22.4 |
83 |
13 |
10 |
6 |
8 |
3 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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