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PDBsum entry 1x9m
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Pore analysis for: 1x9m calculated with MOLE 2.0
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PDB id
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1x9m
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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7 pores,
coloured by radius
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7 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.78 |
1.78 |
30.4 |
-1.31 |
-0.59 |
18.3 |
80 |
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3 |
2 |
0 |
3 |
0 |
0 |
0 |
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DG 16 C DT 17 C DT 19 C DG 20 C DC 11 D DT 12 D D A 13 D DC 14 D
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2 |
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1.24 |
1.58 |
43.5 |
-1.43 |
-0.49 |
19.7 |
75 |
4 |
3 |
2 |
4 |
0 |
1 |
0 |
DA 15 C DG 16 C DT 17 C DA 8 D DC 9 D
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3 |
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2.39 |
2.79 |
45.8 |
-0.42 |
0.10 |
13.5 |
65 |
4 |
2 |
0 |
4 |
2 |
1 |
0 |
DA 15 C DG 16 C DT 17 C DA 8 D DC 9 D
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4 |
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2.34 |
2.34 |
48.7 |
-1.91 |
-0.12 |
32.3 |
73 |
8 |
6 |
0 |
3 |
3 |
0 |
0 |
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5 |
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1.32 |
2.77 |
55.9 |
-1.39 |
-0.41 |
21.3 |
77 |
6 |
5 |
4 |
7 |
3 |
0 |
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DA 8 D
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6 |
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1.55 |
2.07 |
67.4 |
-0.52 |
-0.18 |
13.4 |
78 |
4 |
2 |
2 |
6 |
1 |
1 |
0 |
DA 15 C DT 17 C DT 19 C DG 20 C DA 21 C 8FG 4 D D A 5 D DT 6 D
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7 |
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1.23 |
1.84 |
92.6 |
-0.87 |
-0.07 |
19.6 |
77 |
9 |
5 |
3 |
7 |
3 |
1 |
0 |
DA 15 C DT 17 C 2DT 22 C 8FG 4 D DA 5 D DT 6 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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