PDBsum entry 1wpy Go to PDB code:  Tunnel analysis for: 1wpy calculated with MOLE 2.0 PDB id 1wpy Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 1.52 19.2 1.38 0.24 3.5 74 1 0 0 8 2 0 0  MSE 186 A 2 1.23 2.01 28.7 1.49 0.51 9.9 68 2 2 0 9 4 0 0  MSE 1 A MSE 1 B 3 1.15 1.40 18.1 -1.05 -0.18 13.5 76 3 1 2 2 2 1 0   4 1.16 1.43 38.3 -1.29 -0.46 12.8 82 3 3 6 3 2 1 0  BTN 1301 A 5 1.76 2.05 21.5 -1.37 -0.23 9.9 69 2 0 2 0 2 1 0  BTN 1302 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.