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PDBsum entry 1wmi

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Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 1wmi calculated with MOLE 2.0 PDB id
1wmi
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.39 1.54 20.0 -2.70 -0.82 34.8 80 3 5 0 0 0 0 0  
2 1.42 2.95 23.6 -2.82 -0.73 34.9 83 4 5 0 0 0 0 0  
3 1.58 1.66 27.6 -2.47 -0.71 29.7 83 6 4 0 0 0 0 0  
4 1.57 1.63 33.3 -2.38 -0.75 29.5 84 6 8 0 1 0 0 0  
5 1.58 1.64 36.6 -2.07 -0.65 27.0 80 6 7 0 1 1 0 0  
6 1.44 1.44 17.2 -2.35 -0.41 31.0 74 3 2 1 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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