 |
PDBsum entry 1wc3
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 1wc3 calculated with MOLE 2.0
|
PDB id
|
|
|
|
1wc3
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
2 pores,
coloured by radius |
 |
7 pores,
coloured by radius
|
7 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.44 |
1.54 |
26.4 |
-0.43 |
-0.22 |
14.5 |
84 |
 |
3 |
5 |
1 |
7 |
4 |
1 |
0 |
 |
APC 1500 A
|
 |
 |
2 |
 |
1.66 |
1.79 |
28.8 |
-0.21 |
-0.08 |
10.7 |
89 |
3 |
1 |
4 |
7 |
1 |
5 |
0 |
APC 1500 A SR 1501 A
|
 |
3 |
 |
1.44 |
1.55 |
31.5 |
-0.17 |
-0.18 |
11.0 |
85 |
2 |
3 |
2 |
5 |
4 |
3 |
0 |
APC 1500 A
|
 |
4 |
 |
1.42 |
1.50 |
33.7 |
-0.69 |
-0.29 |
14.2 |
85 |
3 |
7 |
2 |
8 |
5 |
2 |
0 |
APC 1500 B
|
 |
5 |
 |
1.43 |
1.51 |
35.9 |
-1.08 |
-0.31 |
9.6 |
93 |
2 |
1 |
5 |
7 |
0 |
3 |
0 |
APC 1500 B SR 1501 B
|
 |
6 |
 |
1.44 |
1.55 |
44.8 |
-0.84 |
-0.24 |
17.5 |
85 |
3 |
4 |
3 |
6 |
5 |
4 |
0 |
APC 1500 A
|
 |
7 |
 |
1.38 |
1.44 |
44.7 |
-0.76 |
-0.21 |
14.1 |
89 |
3 |
4 |
7 |
8 |
3 |
3 |
0 |
APC 1500 B
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |