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PDBsum entry 1wb3
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Pore analysis for: 1wb3 calculated with  MOLE 2.0
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PDB id
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1wb3
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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12 pores,
coloured by radius |
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20 pores,
coloured by radius
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20 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.02 |
3.45 |
45.7 |
-1.49 |
-0.35 |
16.8 |
85 |
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3 |
3 |
3 |
2 |
1 |
0 |
0 |
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CMH 264 B DXC 1475 C
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2 |
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1.13 |
1.65 |
67.8 |
-0.86 |
-0.12 |
19.2 |
82 |
8 |
4 |
2 |
8 |
1 |
1 |
0 |
CMH 338 D CMH 340 D CMH 371 D
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3 |
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1.80 |
2.02 |
75.5 |
-0.88 |
-0.30 |
12.7 |
92 |
6 |
3 |
8 |
7 |
1 |
1 |
0 |
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4 |
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1.55 |
1.75 |
83.3 |
-0.52 |
-0.15 |
12.3 |
85 |
3 |
4 |
6 |
8 |
1 |
2 |
0 |
CMH 264 B
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5 |
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1.15 |
1.60 |
86.2 |
-1.60 |
-0.39 |
22.0 |
83 |
7 |
4 |
4 |
6 |
2 |
2 |
0 |
GNP 1389 B DXC 1392 B CMH 371 D
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6 |
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1.49 |
2.40 |
87.2 |
-0.76 |
-0.16 |
18.6 |
86 |
10 |
3 |
4 |
9 |
2 |
0 |
0 |
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7 |
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1.33 |
1.44 |
103.3 |
-0.82 |
-0.20 |
15.8 |
83 |
7 |
7 |
5 |
10 |
1 |
3 |
0 |
CMH 264 C
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8 |
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1.57 |
2.53 |
103.9 |
-2.24 |
-0.46 |
24.8 |
85 |
5 |
6 |
7 |
2 |
1 |
1 |
0 |
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9 |
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1.27 |
1.53 |
112.7 |
-1.36 |
-0.38 |
17.2 |
82 |
10 |
6 |
5 |
7 |
2 |
1 |
0 |
DXC 1392 B CMH 338 D
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10 |
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1.22 |
1.20 |
127.3 |
0.09 |
0.14 |
12.1 |
80 |
11 |
5 |
5 |
16 |
5 |
2 |
0 |
CMH 338 C CMH 340 C CMH 371 C SO4 1472 C DXC 1476
C
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11 |
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1.54 |
1.74 |
130.8 |
-1.09 |
-0.25 |
20.2 |
79 |
7 |
7 |
4 |
8 |
2 |
1 |
0 |
CMH 264 B
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12 |
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1.28 |
1.29 |
139.2 |
-0.83 |
-0.24 |
16.5 |
82 |
9 |
7 |
2 |
11 |
2 |
3 |
0 |
CMH 264 B GNP 1389 B SO4 1391 B CMH 371 D
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13 |
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1.49 |
2.40 |
147.6 |
-1.85 |
-0.41 |
23.4 |
84 |
12 |
6 |
7 |
8 |
2 |
0 |
0 |
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14 |
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1.21 |
1.27 |
168.8 |
-1.10 |
-0.32 |
16.6 |
80 |
14 |
8 |
5 |
12 |
1 |
6 |
0 |
GNP 1389 B CMH 264 D CMH 338 D
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15 |
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1.55 |
2.65 |
172.2 |
-1.33 |
-0.35 |
18.7 |
88 |
14 |
7 |
11 |
9 |
4 |
0 |
0 |
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16 |
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1.49 |
2.40 |
170.2 |
-1.57 |
-0.33 |
19.5 |
86 |
11 |
5 |
10 |
10 |
1 |
1 |
0 |
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17 |
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1.23 |
1.32 |
212.1 |
-0.48 |
0.03 |
19.2 |
82 |
14 |
8 |
5 |
25 |
7 |
2 |
0 |
CMH 371 A GNP 1389 B CMH 371 D
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18 |
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1.34 |
1.34 |
210.6 |
-1.66 |
-0.32 |
24.6 |
81 |
19 |
10 |
6 |
11 |
2 |
3 |
0 |
GNP 1389 B CMH 338 D
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19 |
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1.34 |
1.54 |
229.1 |
-2.54 |
-0.45 |
32.1 |
81 |
18 |
16 |
6 |
9 |
4 |
1 |
0 |
GNP 1389 B CMH 371 D
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20 |
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1.41 |
2.46 |
50.6 |
0.59 |
0.12 |
11.6 |
80 |
1 |
3 |
2 |
8 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program