PDBsum entry 1w9c Go to PDB code:  Tunnel analysis for: 1w9c calculated with MOLE 2.0 PDB id 1w9c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.22 2.87 18.4 2.69 0.91 0.6 73 0 0 0 6 4 0 0   2 1.25 1.61 19.1 2.69 0.88 0.6 73 0 0 0 7 3 0 0   3 1.32 2.44 16.0 0.92 0.73 13.2 75 1 1 0 4 2 0 0   4 1.26 1.42 17.3 0.77 0.67 14.2 77 2 1 0 4 2 0 0   5 1.29 2.21 16.9 1.94 0.97 9.1 75 1 1 0 6 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.