PDBsum entry 1w3f Go to PDB code:  Tunnel analysis for: 1w3f calculated with MOLE 2.0 PDB id 1w3f Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.81 2.20 15.2 0.40 0.15 8.0 77 1 0 0 3 3 0 0   2 1.28 2.51 15.8 1.96 0.79 2.2 79 0 1 0 3 2 1 0   3 1.90 2.20 21.5 0.39 0.07 5.6 74 1 1 0 2 4 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.