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PDBsum entry 1vxo
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Tunnel analysis for: 1vxo calculated with  MOLE 2.0
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PDB id
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1vxo
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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7 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.23 |
1.23 |
23.0 |
-0.29 |
0.69 |
5.3 |
55 |
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1 |
0 |
1 |
1 |
8 |
0 |
0 |
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2 |
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1.22 |
2.30 |
20.2 |
0.12 |
0.17 |
6.5 |
84 |
0 |
1 |
3 |
7 |
2 |
0 |
0 |
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3 |
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1.23 |
2.44 |
20.6 |
0.02 |
0.24 |
6.4 |
82 |
0 |
1 |
4 |
6 |
3 |
0 |
0 |
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4 |
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1.17 |
1.36 |
16.6 |
-1.82 |
-0.36 |
32.0 |
79 |
3 |
2 |
0 |
4 |
1 |
1 |
0 |
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5 |
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1.14 |
1.61 |
19.4 |
1.81 |
0.34 |
5.7 |
81 |
2 |
0 |
0 |
8 |
0 |
0 |
0 |
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6 |
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1.39 |
1.39 |
15.9 |
-1.82 |
-0.77 |
21.2 |
82 |
2 |
2 |
1 |
0 |
0 |
0 |
0 |
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7 |
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1.26 |
1.34 |
17.3 |
-2.20 |
-0.72 |
25.3 |
82 |
3 |
2 |
1 |
0 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program