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PDBsum entry 1vsy
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Tunnel analysis for: 1vsy calculated with  MOLE 2.0
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PDB id
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1vsy
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.54 |
1.56 |
15.5 |
-1.95 |
-0.41 |
17.2 |
79 |
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0 |
3 |
1 |
2 |
1 |
0 |
0 |
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2 |
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1.12 |
3.21 |
49.4 |
2.63 |
0.95 |
5.8 |
86 |
4 |
3 |
2 |
19 |
0 |
1 |
0 |
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3 |
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1.70 |
3.91 |
16.6 |
-1.04 |
-0.18 |
20.1 |
83 |
4 |
2 |
3 |
3 |
0 |
1 |
0 |
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4 |
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1.71 |
3.56 |
16.7 |
-1.04 |
-0.24 |
18.0 |
83 |
4 |
2 |
3 |
4 |
0 |
1 |
0 |
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5 |
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1.23 |
3.15 |
15.4 |
-0.59 |
-0.02 |
26.2 |
87 |
1 |
3 |
0 |
3 |
1 |
0 |
0 |
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6 |
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1.23 |
3.15 |
15.4 |
-0.59 |
-0.02 |
26.2 |
87 |
1 |
3 |
0 |
3 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program