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PDBsum entry 1vrw

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1vrw calculated with MOLE 2.0 PDB id
1vrw
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.18 1.36 37.6 -0.09 0.23 11.0 73 1 3 1 5 4 2 0  
2 1.27 1.34 38.2 -0.92 -0.12 14.3 77 3 1 1 2 3 1 0  
3 1.16 1.16 42.2 -2.15 -0.16 19.8 82 4 0 2 2 1 1 0  
4 1.27 1.97 45.1 -0.74 -0.09 17.1 78 3 2 2 5 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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