PDBsum entry 1vri Go to PDB code:  Pore analysis for: 1vri calculated with MOLE 2.0 PDB id 1vri Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.53 2.94 49.2 -0.74 -0.07 14.6 77 4 6 6 9 4 0 0   2 1.53 2.94 49.2 -0.74 -0.07 14.6 77 4 6 6 9 4 0 0   3 1.64 3.02 104.8 -1.85 -0.34 30.3 77 10 15 3 7 3 3 0   4 1.53 3.56 113.5 -0.76 0.08 26.6 79 16 14 1 13 3 0 0   5 1.27 2.45 132.9 -1.51 -0.30 23.9 80 10 12 9 11 6 2 0   6 1.38 1.54 188.9 -1.52 -0.37 18.6 80 13 16 15 15 8 4 0   7 1.82 2.83 215.5 -2.02 -0.47 22.9 81 14 14 16 9 6 6 0   8 1.18 1.54 225.3 -1.48 -0.31 21.2 87 11 17 14 19 3 3 0   9 1.92 2.02 245.1 -1.49 -0.31 17.9 84 12 12 19 12 7 4 0   10 1.46 1.77 250.5 -1.47 -0.31 22.4 81 17 24 17 28 8 4 0   11 1.29 1.27 264.2 -1.55 -0.33 20.5 80 20 21 15 21 9 7 0   12 1.23 1.27 298.5 -1.77 -0.40 19.9 81 19 20 23 17 12 8 0   13 1.53 2.92 283.4 -1.41 -0.26 23.1 84 15 21 13 22 3 2 0   14 1.23 2.41 301.6 -1.49 -0.39 19.0 81 19 27 25 29 13 6 0   15 1.30 1.50 298.5 -1.42 -0.29 20.4 84 16 25 21 28 7 3 0   16 1.51 2.87 330.7 -1.69 -0.29 21.3 81 24 24 18 22 9 8 0   17 1.52 1.69 315.1 -1.14 -0.24 18.9 86 16 24 24 35 6 0 0   18 1.21 2.61 349.3 -1.57 -0.35 19.6 82 23 28 29 30 14 6 0   19 1.18 1.66 382.6 -1.30 -0.26 21.5 82 25 38 24 40 12 3 0   20 1.33 1.36 375.0 -1.95 -0.38 23.9 83 29 30 29 27 9 9 0   21 1.83 1.68 406.3 -1.75 -0.33 22.1 83 24 27 29 22 10 10 0   22 1.40 1.42 421.1 -2.08 -0.46 24.0 84 41 38 41 30 8 6 0   23 1.67 1.87 467.2 -1.97 -0.37 23.0 82 38 32 31 26 12 12 0   24 1.49 1.83 527.0 -1.92 -0.41 22.2 85 36 32 42 31 11 9 0   25 1.64 2.96 542.6 -2.12 -0.46 21.0 83 36 29 48 24 14 12 0   26 1.48 2.15 570.3 -1.67 -0.25 22.6 83 50 39 39 37 11 12 0   27 1.54 2.89 594.3 -1.35 -0.25 19.2 81 30 36 42 44 20 12 0   28 1.31 1.15 596.5 -1.87 -0.39 25.3 82 50 54 38 47 13 10 0   29 1.20 1.11 602.6 -1.79 -0.34 24.2 82 52 50 39 42 14 10 0   30 1.80 3.10 861.7 -1.92 -0.34 24.1 83 76 61 60 49 15 18 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.