PDBsum entry 1vpg Go to PDB code:  Pore analysis for: 1vpg calculated with MOLE 2.0 PDB id 1vpg Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.19 1.19 28.4 0.66 0.25 11.3 75 3 2 0 3 3 0 0  MSE 144 A MSE 165 A 2 1.18 1.18 33.4 0.97 0.25 9.7 77 3 3 0 6 3 0 1  MSE 144 A MSE 165 A UNL 301 A 3 1.18 1.18 38.7 0.98 0.23 8.8 76 5 2 1 6 3 0 1  MSE 144 A MSE 165 A UNL 301 A 4 1.30 1.39 61.0 1.61 0.46 3.4 76 2 0 3 13 4 1 0  UNL 301 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.