PDBsum entry 1vni Go to PDB code:  Pore analysis for: 1vni calculated with MOLE 2.0 PDB id 1vni Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.39 2.28 29.4 -1.11 -0.41 18.1 81 3 3 1 3 2 1 0   2 3.30 4.45 34.6 -1.22 -0.39 3.1 84 0 1 6 2 2 4 0   3 3.17 3.17 38.0 -0.02 -0.08 13.4 80 2 1 0 5 0 3 0   4 1.37 2.25 41.4 -1.18 -0.42 12.6 76 3 5 3 1 3 6 0   5 3.16 3.18 55.5 -0.02 -0.14 6.0 84 1 1 3 7 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.