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PDBsum entry 1vlu
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Tunnel analysis for: 1vlu calculated with  MOLE 2.0
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PDB id
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1vlu
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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3 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.11 |
1.71 |
15.1 |
0.78 |
0.31 |
12.9 |
80 |
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3 |
0 |
1 |
6 |
0 |
0 |
0 |
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2 |
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1.18 |
1.18 |
17.1 |
-1.00 |
-0.39 |
18.4 |
94 |
3 |
2 |
2 |
3 |
0 |
0 |
0 |
MSE 261 A
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3 |
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1.21 |
1.21 |
17.4 |
-1.46 |
-0.33 |
20.6 |
94 |
3 |
2 |
3 |
2 |
0 |
0 |
0 |
MSE 261 A
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4 |
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1.21 |
1.21 |
17.8 |
-0.99 |
-0.43 |
17.7 |
91 |
4 |
2 |
1 |
3 |
0 |
0 |
0 |
MSE 261 A
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5 |
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1.22 |
1.23 |
18.1 |
-1.42 |
-0.37 |
20.1 |
91 |
4 |
2 |
2 |
2 |
0 |
0 |
0 |
MSE 261 A
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6 |
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1.06 |
2.46 |
21.6 |
-0.29 |
0.10 |
16.0 |
91 |
3 |
1 |
2 |
5 |
0 |
1 |
0 |
MSE 261 A
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7 |
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1.37 |
1.48 |
19.7 |
-0.78 |
-0.46 |
13.2 |
87 |
2 |
1 |
2 |
1 |
0 |
0 |
0 |
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8 |
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1.37 |
1.48 |
22.6 |
-0.61 |
-0.35 |
13.3 |
83 |
2 |
1 |
2 |
2 |
0 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program