PDBsum entry 1vlo Go to PDB code:  Tunnel analysis for: 1vlo calculated with MOLE 2.0 PDB id 1vlo Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.41 1.47 29.0 -0.89 0.19 11.1 70 2 1 1 2 5 1 0  MSE 233 A 2 1.38 1.80 31.0 -1.23 -0.04 18.3 77 1 2 3 4 3 0 0   3 1.39 1.86 35.5 -0.81 -0.23 13.8 83 1 2 2 5 3 0 0  MSE 52 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.