PDBsum entry 1vkl Go to PDB code:  Pore analysis for: 1vkl calculated with MOLE 2.0 PDB id 1vkl Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.04 2.15 28.2 -1.76 -0.29 22.3 95 3 2 3 1 1 0 0   2 1.81 2.00 33.9 -2.04 -0.57 19.9 86 5 4 5 0 1 2 0  SEP 116 A 3 1.71 2.51 34.6 -2.39 -0.60 24.8 93 7 3 5 2 0 0 0  SEP 116 B 4 1.18 1.18 145.2 -2.13 -0.63 23.1 80 6 9 7 4 1 1 0   5 1.33 1.33 156.5 -2.79 -0.75 26.6 80 10 12 10 0 1 1 0   6 1.30 1.29 248.6 -2.63 -0.70 27.2 80 15 16 13 5 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.