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PDBsum entry 1vkh

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1vkh calculated with MOLE 2.0 PDB id
1vkh
Pores calculated on whole structure Pores calculated excluding ligands

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0 pores, coloured by radius 1 pore, coloured by radius 1 pore, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.21 1.15 246.8 -0.35 -0.11 13.8 78 12 9 10 17 7 0 3  MSE 60 A MSE 130 A MSE 137 A GOL 456 A MSE 189 B
MSE 203 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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