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PDBsum entry 1vkg

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1vkg calculated with MOLE 2.0 PDB id
1vkg
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.64 2.12 44.0 -1.01 -0.17 17.0 76 5 3 4 3 4 3 0  CRI 402 A CRI 402 B
2 2.88 2.96 54.7 0.16 0.15 8.6 71 3 3 1 5 5 4 0  CRI 402 A CRI 402 B
3 1.64 2.13 57.2 -0.92 -0.32 16.9 84 6 5 5 5 3 2 0  CRI 402 A CRI 402 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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