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PDBsum entry 1vkf

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1vkf calculated with MOLE 2.0 PDB id
1vkf
Pores calculated on whole structure Pores calculated excluding ligands

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0 pores, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.80 1.91 26.9 -0.89 0.04 18.3 75 2 4 2 5 3 0 0  PO4 401 B
2 1.71 3.34 33.6 -0.42 0.21 14.9 73 4 1 2 2 3 1 0  CIT 501 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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