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PDBsum entry 1vji
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Plant protein
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PDB id
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1vji
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Contents |
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* Residue conservation analysis
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References listed in PDB file
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Key reference
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Title
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X-Ray structure of arabidopsis at1g77680, 12-Oxophytodienoate reductase isoform 1.
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Authors
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B.G.Fox,
T.E.Malone,
K.A.Johnson,
S.E.Madson,
D.Aceti,
C.A.Bingman,
P.G.Blommel,
B.Buchan,
B.Burns,
J.Cao,
C.Cornilescu,
J.Doreleijers,
J.Ellefson,
R.Frederick,
H.Geetha,
D.Hruby,
W.B.Jeon,
T.Kimball,
J.Kunert,
J.L.Markley,
C.Newman,
A.Olson,
F.C.Peterson,
G.N.Phillips,
J.Primm,
B.Ramirez,
N.S.Rosenberg,
M.Runnels,
K.Seder,
J.Shaw,
D.W.Smith,
H.Sreenath,
J.Song,
M.R.Sussman,
S.Thao,
D.Troestler,
E.Tyler,
R.Tyler,
E.Ulrich,
D.Vinarov,
F.Vojtik,
B.F.Volkman,
G.Wesenberg,
R.L.Wrobel,
J.Zhang,
Q.Zhao,
Z.Zolnai.
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Ref.
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Proteins, 2005,
61,
206-208.
[DOI no: ]
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PubMed id
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Abstract
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No abstract given.
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Figure 1.
Figure 1. A: Stereo representation of the X-ray structure of
Arabidopsis OPR1 (1VJI) showing the position of FMN and the
putative substrate-binding loop (violet). B: comparison of the
positions of the putative substrate-binding loop of OPR1
(violet) with those observed in structures of Lycopersicon
esculentum (tomato) OPR1 (grey) and Arabidopsis OPR3 (green).
Positions obtained from alignment of the backbone atoms of each
structure with Arabidopsis OPR1. The position of bound
9R,13R-OPDA in the 1ICQ structure is also shown (grey).The
Arabidopsis OPR1 loop consists of P132-P149, the tomato OPR1
loop consists of residues G136-R153, and the Arabidopsis OPR3
loop consists of I133-Y150. In the tomato OPR1 loop, the
backbone traces from 1ICQ (with 9R, 13R-OPDA bound) and 1ICS
(with PEG bound) are indistinguishable.
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The above figure is
reprinted
by permission from John Wiley & Sons, Inc.:
Proteins
(2005,
61,
206-208)
copyright 2005.
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