PDBsum entry 1vj0 Go to PDB code:  Pore analysis for: 1vj0 calculated with MOLE 2.0 PDB id 1vj0 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.35 2.39 38.5 -0.99 -0.37 17.3 83 7 2 2 7 0 1 2   2 2.41 4.50 40.4 -2.94 -0.58 30.5 87 5 1 2 1 0 1 0   3 1.96 2.09 77.3 -1.75 -0.37 25.0 74 8 7 3 4 2 4 3  UNL 2001 A 4 1.66 2.91 87.3 -1.25 -0.28 17.7 78 11 4 4 8 2 3 3   5 2.02 2.09 93.5 -1.22 -0.09 25.6 74 9 6 1 6 2 2 2  UNL 2001 A 6 1.53 1.62 72.7 -1.60 -0.41 23.5 84 12 7 8 6 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.