PDBsum entry 1vhj Go to PDB code:  Tunnel analysis for: 1vhj calculated with MOLE 2.0 PDB id 1vhj Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.29 1.29 18.2 -0.14 -0.27 7.7 83 1 1 2 2 2 0 0   2 1.34 1.37 16.5 0.26 -0.28 5.4 89 1 0 1 4 0 0 0   3 1.39 1.39 17.6 0.46 -0.05 7.3 87 1 1 2 4 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.