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PDBsum entry 1vhb

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Pore analysis for: 1vhb calculated with MOLE 2.0 PDB id
1vhb
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.21 1.30 27.8 1.58 0.82 3.8 71 2 0 0 7 4 1 0  HEM 150 B
2 1.36 2.60 33.5 2.24 0.65 1.5 79 0 1 0 13 1 2 0  
3 1.33 2.48 45.5 1.76 0.63 4.4 78 2 0 0 15 1 3 0  HEM 150 A
4 1.34 2.56 55.6 2.01 0.74 3.9 83 2 0 0 20 2 3 0  HEM 150 A
5 1.29 1.27 65.2 2.31 0.81 4.1 83 3 0 1 20 3 2 0  HEM 150 B
6 1.18 1.63 74.0 2.23 0.88 5.7 82 4 1 0 26 6 2 0  HEM 150 A HEM 150 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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