PDBsum entry 1vh8 Go to PDB code:  Pore analysis for: 1vh8 calculated with MOLE 2.0 PDB id 1vh8 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.32 2.41 36.0 -1.74 -0.75 10.6 83 1 1 3 0 1 1 0   2 1.48 2.14 37.7 -0.93 -0.23 21.4 95 5 4 1 5 0 0 0  MSE 106 E MSE 113 E 3 1.43 2.46 40.3 -1.40 -0.32 24.9 92 5 5 1 3 0 0 0   4 2.06 3.33 45.8 -1.91 -0.25 31.2 78 8 5 0 3 2 2 0  MSE 113 C 5 2.25 2.26 52.2 -1.94 -0.73 19.3 81 6 4 4 2 1 1 0   6 3.11 3.26 54.0 -2.01 -0.65 23.3 84 5 3 2 2 0 2 0   7 2.08 3.31 70.0 -1.48 -0.43 19.0 81 7 5 5 6 3 1 0  MSE 113 C 8 2.09 3.31 71.8 -1.51 -0.34 21.8 82 6 4 3 6 2 2 0  MSE 113 C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.