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PDBsum entry 1vh1
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Pore analysis for: 1vh1 calculated with  MOLE 2.0
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PDB id
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1vh1
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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3 pores,
coloured by radius |
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5 pores,
coloured by radius
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5 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.24 |
4.57 |
26.5 |
-2.97 |
-0.77 |
36.7 |
84 |
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3 |
4 |
1 |
1 |
0 |
0 |
0 |
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2 |
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1.28 |
2.85 |
27.5 |
-2.09 |
-0.46 |
29.2 |
80 |
4 |
2 |
1 |
4 |
0 |
0 |
0 |
MSE 29 C
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3 |
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1.69 |
1.69 |
41.4 |
-2.19 |
-0.63 |
26.5 |
81 |
7 |
5 |
3 |
2 |
2 |
0 |
0 |
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4 |
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2.24 |
4.58 |
50.3 |
-2.30 |
-0.71 |
22.0 |
84 |
5 |
5 |
3 |
2 |
1 |
0 |
0 |
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5 |
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1.20 |
1.20 |
85.8 |
-1.51 |
-0.32 |
19.6 |
81 |
9 |
7 |
5 |
5 |
6 |
0 |
0 |
MSE 123 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program