PDBsum entry 1vf7 Go to PDB code:  Pore analysis for: 1vf7 calculated with MOLE 2.0 PDB id 1vf7 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   17 pores, coloured by radius 17 pores, coloured by radius 17 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.44 1.44 58.9 -1.37 -0.61 7.9 92 1 2 8 6 1 0 0   2 1.76 1.84 71.2 -1.04 -0.25 10.9 78 3 4 7 8 2 0 0   3 1.45 1.45 86.1 -1.77 -0.50 11.3 87 2 3 10 8 3 0 0   4 1.44 1.71 86.0 -1.70 -0.48 23.8 89 9 5 6 5 2 0 0   5 1.85 2.07 89.2 -1.89 -0.54 14.5 80 3 6 12 7 2 0 0   6 1.76 1.84 103.3 -2.02 -0.64 13.0 80 3 6 15 7 2 0 0   7 1.50 1.66 113.9 -1.79 -0.46 26.5 87 12 10 8 5 3 0 0   8 1.43 1.73 114.1 -1.80 -0.51 25.0 90 11 8 8 6 2 0 0   9 1.88 2.04 121.9 -2.01 -0.54 12.1 79 2 5 17 7 4 0 0   10 1.62 1.93 139.3 -2.04 -0.66 10.4 83 2 5 19 11 4 0 0   11 1.28 1.46 173.6 -1.58 -0.43 24.9 86 14 12 7 12 3 0 0   12 1.61 1.88 279.7 -2.26 -0.64 11.0 83 1 11 37 13 9 0 0   13 1.21 1.56 444.1 -2.06 -0.49 12.9 81 8 18 51 18 15 2 0   14 1.52 1.81 53.7 -1.19 -0.35 22.4 89 4 5 4 3 1 0 0   15 1.58 1.81 58.3 -1.61 -0.38 24.5 83 5 5 4 1 2 0 0   16 1.30 2.17 75.1 -1.14 -0.38 15.9 80 4 5 4 5 2 2 0   17 1.58 1.61 49.6 -1.70 -0.37 25.0 81 6 5 4 3 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.