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PDBsum entry 1vbx
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Tunnel analysis for: 1vbx calculated with  MOLE 2.0
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PDB id
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1vbx
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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3 tunnels,
coloured by tunnel radius |
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3 tunnels,
coloured by
tunnel radius
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3 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.16 |
1.37 |
30.2 |
-0.43 |
-0.25 |
14.5 |
67 |
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3 |
1 |
0 |
2 |
1 |
0 |
0 |
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A 142 B A 143 B
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2 |
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1.16 |
1.37 |
30.4 |
-0.50 |
-0.23 |
15.6 |
67 |
3 |
1 |
0 |
2 |
1 |
0 |
0 |
C 146 B C 147 B A 148 B U 149 B
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3 |
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1.17 |
1.37 |
37.8 |
-0.41 |
-0.34 |
12.4 |
67 |
2 |
1 |
0 |
2 |
1 |
0 |
0 |
C 141 B A 142 B C 157 B G 158 B G 159 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program