PDBsum entry 1vbp Go to PDB code:  Tunnel analysis for: 1vbp calculated with MOLE 2.0 PDB id 1vbp Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 3.24 29.4 0.41 0.45 2.5 68 1 0 1 5 7 1 0   2 1.20 3.22 30.0 0.54 0.45 2.1 72 1 0 1 5 5 1 0   3 1.29 1.32 33.0 0.72 0.57 2.4 65 1 0 1 5 7 1 0   4 1.32 1.43 33.6 0.64 0.50 2.0 69 1 0 1 5 5 1 0   5 1.24 2.86 17.5 2.77 0.99 0.8 69 0 0 0 5 3 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.