PDBsum entry 1v8o Go to PDB code:  Pore analysis for: 1v8o calculated with MOLE 2.0 PDB id 1v8o Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.49 1.63 27.5 -2.15 -0.32 26.6 75 5 4 0 2 2 0 0  CL 1001 B 2 1.72 4.49 28.8 -1.05 -0.11 23.0 77 3 2 0 6 2 0 0   3 3.47 3.98 30.4 -2.01 -0.20 27.1 71 4 5 1 4 4 0 0   4 2.11 2.31 36.8 -1.34 -0.14 19.5 79 5 3 0 6 2 0 0  MSE 1 C i:B 5 1.73 1.72 38.6 -1.73 -0.30 27.3 78 5 7 0 4 2 0 0  CL 1002 A 6 1.49 1.62 39.7 -1.87 -0.30 26.5 77 5 6 0 4 2 0 0  CL 1001 B 7 1.15 1.26 46.6 -1.16 -0.22 20.5 77 4 5 2 6 4 0 0  MSE 80 C MSE 1 F 8 1.49 1.62 53.8 -2.12 -0.28 22.8 75 10 3 2 2 6 0 0  CL 1002 A CL 1001 B 9 1.14 1.17 58.8 -0.69 -0.14 16.7 83 5 6 1 10 2 0 0  MSE 65 A CL 1001 B 10 1.15 1.17 66.7 -0.93 -0.11 17.1 79 6 5 2 10 5 0 0  MSE 65 A CL 1002 A 11 1.91 2.23 68.2 -1.51 -0.12 24.4 78 6 8 1 8 5 0 0   12 1.18 1.37 73.7 -1.19 -0.20 20.8 76 8 7 2 7 6 0 0  CL 1002 A MSE 80 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.