 |
PDBsum entry 1v6l
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 1v6l calculated with MOLE 2.0
|
PDB id
|
|
|
|
1v6l
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
6 pores,
coloured by radius |
 |
6 pores,
coloured by radius
|
6 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.53 |
2.74 |
37.3 |
-1.58 |
-0.75 |
8.0 |
101 |
 |
2 |
2 |
10 |
1 |
0 |
0 |
0 |
 |
|
 |
 |
2 |
 |
2.53 |
3.23 |
47.5 |
-0.73 |
-0.44 |
8.1 |
95 |
2 |
3 |
7 |
3 |
0 |
0 |
0 |
|
 |
3 |
 |
1.22 |
1.43 |
62.5 |
-0.65 |
-0.46 |
11.4 |
90 |
2 |
4 |
6 |
2 |
3 |
0 |
0 |
|
 |
4 |
 |
1.25 |
1.43 |
90.3 |
-1.18 |
-0.60 |
10.7 |
94 |
4 |
5 |
16 |
3 |
3 |
0 |
0 |
|
 |
5 |
 |
2.02 |
2.52 |
141.9 |
-1.56 |
-0.68 |
12.1 |
99 |
4 |
2 |
15 |
3 |
0 |
2 |
0 |
|
 |
6 |
 |
1.21 |
1.35 |
163.4 |
-1.54 |
-0.62 |
12.4 |
96 |
4 |
4 |
13 |
5 |
0 |
2 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |