PDBsum entry 1v6j Go to PDB code:  Pore analysis for: 1v6j calculated with MOLE 2.0 PDB id 1v6j Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.63 3.91 32.0 -1.50 -0.79 10.7 100 4 2 10 1 0 0 0   2 1.32 1.53 37.5 -1.13 -0.61 8.7 93 2 3 8 1 3 0 0   3 1.32 1.54 43.3 -0.65 -0.35 7.8 92 0 2 8 4 3 1 0   4 1.32 1.54 47.9 -0.91 -0.63 7.2 94 2 3 9 2 3 0 0   5 1.46 1.64 53.5 -1.15 -0.51 10.4 100 2 2 10 4 0 1 0   6 1.46 1.64 58.1 -1.10 -0.59 9.2 100 2 2 12 4 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.