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PDBsum entry 1v62

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Tunnel analysis for: 1v62 calculated with MOLE 2.0 PDB id
1v62
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.32 1.35 15.1 1.29 0.16 5.1 88 0 1 1 5 0 1 0  
2 1.37 1.56 16.6 0.46 -0.35 4.7 91 0 1 2 6 0 0 0  
3 1.36 1.55 17.2 -0.20 -0.25 13.7 94 2 1 2 4 0 0 0  
4 1.37 1.55 18.2 0.99 -0.13 4.3 92 0 1 2 7 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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