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PDBsum entry 1v59

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1v59 calculated with MOLE 2.0 PDB id
1v59
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.41 2.34 33.2 -0.54 0.03 22.3 81 6 4 1 6 1 0 0  
2 1.48 3.46 37.7 -1.51 -0.33 28.4 83 7 4 1 4 0 0 0  
3 1.33 2.72 38.3 -2.73 -0.57 30.5 84 9 6 6 1 0 0 0  
4 2.26 2.84 43.6 -0.36 -0.26 11.5 76 4 2 1 5 2 1 2  FAD 480 A NAD 482 A
5 2.17 2.37 45.3 -0.53 -0.33 12.8 76 4 3 1 5 2 1 2  FAD 481 B NAD 483 B
6 1.59 3.42 74.2 -1.82 -0.43 27.4 83 8 6 3 7 0 0 0  
7 1.12 2.18 75.4 0.09 0.04 16.0 86 6 3 1 10 1 0 0  
8 1.47 1.73 113.2 -1.25 -0.27 19.5 78 11 7 3 7 4 2 2  FAD 480 A NAD 482 A
9 1.75 1.75 28.3 -1.70 -0.53 28.5 75 3 2 1 1 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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