PDBsum entry 1v55 Go to PDB code:  Pore analysis for: 1v55 calculated with MOLE 2.0 PDB id 1v55 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   20 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.57 5.10 32.6 -1.83 -0.33 20.7 75 5 3 2 0 3 2 0  PGV 4524 N TGL 4523 Q 2 1.80 1.99 39.7 -0.85 -0.33 8.1 76 1 4 3 1 3 3 1   3 2.72 5.79 41.7 -1.24 -0.02 19.3 72 5 3 1 2 5 0 0  TGL 3521 A TGL 3523 A PGV 3524 A 4 1.84 1.90 42.8 -1.11 -0.38 16.1 88 5 1 3 2 1 0 0  PGV 4524 N TGL 4523 Q 5 1.84 1.90 48.1 -1.32 -0.23 19.4 81 7 3 2 2 3 2 0  PGV 4524 N 6 1.91 3.53 49.1 -1.95 -0.36 19.4 76 4 4 2 0 4 2 0  PEK 3265 C 7 1.80 2.07 51.1 -0.31 -0.18 8.6 81 3 4 2 4 2 2 1  PGV 3524 A 8 1.17 1.17 57.8 1.04 0.69 2.7 68 2 0 1 7 6 0 0  PEK 3264 C PGV 3267 C CDL 3270 C 9 1.38 1.36 58.5 -0.88 -0.42 11.5 85 3 5 4 2 2 1 1  PGV 4524 N TGL 4523 Q 10 1.82 2.00 63.7 -1.40 -0.40 16.6 82 5 6 3 2 3 1 1  PEK 3265 C 11 1.36 1.35 63.9 -1.05 -0.36 13.9 82 5 7 3 2 3 3 1  PGV 4524 N 12 1.35 1.36 74.3 -1.66 -0.46 20.3 87 7 5 4 2 3 0 0  PEK 3265 C PGV 4524 N TGL 4523 Q 13 1.28 1.54 80.8 -1.97 -0.33 20.4 78 8 2 4 3 4 1 1  PGV 3268 C 14 1.25 1.53 83.3 -1.06 -0.39 9.8 88 3 5 8 7 3 3 0  PGV 3268 C CDL 4269 T 15 1.35 1.82 87.4 -1.55 -0.40 16.5 84 8 4 9 2 3 1 1  PGV 3268 C CDL 4269 T 16 2.44 3.51 88.8 -0.23 0.22 9.8 73 5 5 7 10 9 1 3  PEK 3265 C CDL 3269 G CHD 3085 O PGV 4268 P CHD 4525 P 17 1.77 2.13 165.0 -0.45 -0.10 10.2 82 7 10 13 17 10 3 2  CHD 4085 B PGV 3268 C CHD 3525 C PEK 4265 P CDL 4269 T 18 1.45 1.60 166.7 -0.70 -0.07 10.2 78 8 9 10 14 14 3 2  CHD 4085 B PGV 3268 C CHD 3525 C PEK 4265 P CDL 4269 T 19 1.33 2.92 176.1 -0.71 0.00 12.9 77 13 7 11 13 14 1 3  CHD 4085 B PGV 3268 C CHD 3525 C PEK 4265 P CDL 4269 T 20 1.84 2.30 183.1 0.25 0.25 8.3 76 8 10 11 28 17 2 3  CHD 4085 B PEK 3265 C PGV 3268 C CDL 3269 G CHD 3085 O PEK 4265 P PGV 4268 P CDL 4269 T 21 1.47 1.70 204.3 -0.64 0.02 11.9 76 13 10 10 17 15 5 1  PGV 3524 A CHD 4085 B PGV 3268 C CHD 3525 C PEK 4265 P CDL 4269 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.