PDBsum entry 1v54 Go to PDB code:  Pore analysis for: 1v54 calculated with MOLE 2.0 PDB id 1v54 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   23 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.27 1.54 32.5 -1.45 -0.59 11.2 82 3 2 3 1 2 1 0  PGV 3268 C 2 1.42 1.77 34.3 1.14 0.28 5.5 86 1 2 4 11 1 1 0   3 4.80 6.24 36.2 -0.43 0.20 7.5 73 3 1 2 4 5 0 0  PGV 3268 C CHD 3525 C CDL 4269 T 4 1.19 1.18 38.1 1.01 0.47 6.2 70 1 1 2 13 5 0 0  DMU 4526 Z 5 2.12 3.68 43.4 -1.96 -0.60 22.5 82 4 5 5 2 1 3 0   6 1.35 1.85 47.8 -0.80 -0.03 13.6 76 3 5 4 6 6 2 0  FME 1 B 7 1.16 1.34 53.0 -1.84 -0.12 26.4 76 7 1 2 2 2 0 1   8 1.25 1.51 54.8 -0.27 0.14 8.5 74 3 2 2 6 7 1 0  PGV 3268 C CHD 3525 C CDL 4269 T 9 2.13 3.66 60.1 -1.16 0.00 19.2 75 1 5 4 6 6 1 0  PGV 3268 C CHD 3525 C CDL 4269 T 10 1.47 1.78 74.6 0.12 -0.01 13.6 86 3 2 4 11 0 2 0   11 1.31 1.46 84.7 -0.50 0.08 15.4 71 7 5 3 6 11 3 0  TGL 4522 N 12 1.44 1.61 115.3 -1.23 -0.31 15.7 81 10 9 6 4 4 4 1  PGV 4524 N 13 1.32 1.75 125.1 -1.40 -0.33 18.1 76 6 6 3 7 5 4 0  FME 1 O DMU 4526 Z 14 1.17 1.17 132.5 -1.48 -0.33 17.9 77 7 6 5 8 4 3 0  TGL 4521 N FME 1 O DMU 4526 Z 15 1.21 1.25 138.7 -0.49 -0.08 13.3 81 9 6 7 15 9 1 1  PGV 3524 A CHD 4085 B PGV 3268 C TGL 3523 D PEK 4265 P CDL 4269 T 16 1.73 1.73 148.6 1.51 0.62 5.2 78 9 0 3 32 15 2 0  HEA 515 N HEA 516 N TGL 4521 N TGL 4522 N PSC 4230 O 17 1.38 1.54 166.3 -0.43 0.04 12.9 77 10 10 8 20 14 4 1  PEK 3265 C PGV 3268 C CDL 3269 G PGV 4524 N CHD 3085 O PGV 4268 P CDL 4269 T 18 1.83 1.83 174.9 -0.60 -0.04 14.0 79 10 10 9 19 12 2 2  PEK 3265 C PGV 3268 C CDL 3269 G CHD 3085 O PGV 4268 P CDL 4269 T 19 1.03 1.96 177.6 2.11 0.76 1.9 71 3 0 4 32 14 1 1  PEK 3265 C PGV 3268 C CDL 3269 G TGL 4521 N CHD 3085 O PGV 4268 P CDL 4269 T 20 1.43 1.50 211.6 -0.51 -0.06 11.4 74 12 10 10 18 21 7 3  PEK 3265 C CDL 3269 G TGL 4522 N CHD 3085 O PGV 4268 P CHD 4525 P 21 1.25 1.49 226.4 0.44 0.19 8.8 74 6 6 10 26 14 3 1  PEK 3265 C PGV 3268 C CDL 3269 G TGL 4521 N CHD 3085 O PGV 4268 P CHD 4525 P Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.