PDBsum entry 1v3l Go to PDB code:  Pore analysis for: 1v3l calculated with MOLE 2.0 PDB id 1v3l Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 4.01 4.02 53.2 -0.92 -0.35 10.0 97 0 5 7 7 0 1 0   2 3.49 3.59 58.4 -1.36 -0.52 9.4 97 0 6 10 7 0 1 0   3 2.37 2.40 64.9 -1.35 -0.45 12.7 84 2 3 5 3 4 1 0   4 2.36 2.40 67.3 -1.23 -0.42 11.4 85 2 2 6 3 4 1 0   5 3.27 3.40 73.1 -1.37 -0.54 8.2 96 0 5 12 7 1 1 0   6 2.31 2.46 105.7 -1.17 -0.43 11.0 89 2 7 12 6 4 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.